BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A05SP1|AL427700
(1012 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1452 1638 0.0
>3x_Contig1452
Length = 10057
Score = 1638 bits (824), Expect = 0.0
Identities = 855/863 (99%), Gaps = 4/863 (0%)
Strand = Plus / Minus
Query: 1 tatggagcatcgttgagacttctgatgttacggattccttagaaatattgtacaactccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 tatggagcatcgttgagacttctgatgttacggattccttagaaatattgtacaactccg 800
Query: 61 atagttctgttagaatggtgttcattttgatttttgaggtctcatattggttttttttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 atagttctgttagaatggtgttcattttgatttttgaggtctcatattggttttttttag 740
Query: 121 agcctaattcgccctgcaatcttaccacttcttgctgctcatttctacaatcgtttaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 agcctaattcgccctgcaatcttaccacttcttgctgctcatttctacaatcgtttaata 680
Query: 181 aagataaaagtctttctttttctgattgatattcaaatagttctatattcttctcctcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aagataaaagtctttctttttctgattgatattcaaatagttctatattcttctcctcta 620
Query: 241 ataatctttgaaaattctgaagcatgtcctccaactcactcttagaatttggtagaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ataatctttgaaaattctgaagcatgtcctccaactcactcttagaatttggtagaattt 560
Query: 301 ctatcgaggattgtaacctttgtatctgttccataaatgatgttttattatgtttgaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ctatcgaggattgtaacctttgtatctgttccataaatgatgttttattatgtttgaggt 500
Query: 361 tatccaacttggacaaggtttcttgaaatttttgatttgaactgaaaagtgcatctgatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tatccaacttggacaaggtttcttgaaatttttgatttgaactgaaaagtgcatctgatt 440
Query: 421 cctttgtgattatmtttmggtcatgttcaatgctcttcacttctttttgatactcttcta 480
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cctttgtgattatatttaggtcatgttcaatgctcttcacttctttttgatactcttcta 380
Query: 481 ttttgttctccagtttagatatgtttaccttggtcgcggtagacctatctttatctgttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttttgttctccagtttagatatgtttaccttggtcgcggtagacctatctttatctgttt 320
Query: 541 tcagatgctctacggattgttttaataatttgatatcaatagatatatccttcttgatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcagatgctctacggattgttttaataatttgatatcaatagatatatccttcttgatgg 260
Query: 601 ttttgaggttgtctaatgccttagtgaacttcattgcttggaacgatttcactcaacaca 660
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | |
Sbjct: 259 ttttgaggttgtctaatgccttagtgaacttcattgcttggaa-gatttca-tca--aaa 204
Query: 661 cgtttcttcaagatagacggttcacttaatggccataatgagtcttcttgatgacaaaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cgtttcttcaagatagacggttcacttaatggccataatgagtcttcttgatgacaaaat 144
Query: 721 ataacataatcaaggatagccttcggtacgcccaaatataatgggatctgttggtccaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ataacataatcaaggatagccttcggtacgcccaaatataatgggatctgttggtccaat 84
Query: 781 tcattggctctggtacttaatgtcgttctctctccatgattaattgccaccaattggcct 840
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 83 tcattggctctggtacttaatggcgttctctctccatgattaattgccaccaattggcct 24
Query: 841 tctaaagtcttgaaagtattcgc 863
|||||||||||||||||||||||
Sbjct: 23 tctaaagtcttgaaagtattcgc 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9302
Number of Sequences: 1807
Number of extensions: 9302
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 1012
length of database: 10,358,551
effective HSP length: 16
effective length of query: 996
effective length of database: 10,329,639
effective search space: 10288320444
effective search space used: 10288320444
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)